If you’re anything like me and love the perfect blend of rich, gooey, and creamy in a dessert, this Chocolate Chip Cookie Cups with Cheesecake Filling Recipe is going to become your new obsession. Imagine a warm, freshly baked chocolate chip cookie shaped into a cup, cradling a luscious, velvety cheesecake filling that melts in your mouth. It’s the ultimate treat that combines the best of two beloved desserts in one irresistible bite. Whether you’re baking for friends, family, or just yourself, this recipe is pure happiness you can share (or keep all to yourself—no judgment here)!

Ingredients You’ll Need
Every great recipe begins with ingredients that play a starring role, and this one is no exception. Each ingredient is carefully selected for its contribution to the perfect balance of texture, flavor, and that beautiful golden color that makes these cookie cups irresistible.
- 1 cup butter (softened): Adds richness and tenderness to the cookie base.
- 1 cup sugar: Sweetness and helps create a golden crust.
- 1 cup brown sugar (packed): Adds moisture and a deeper caramel flavor.
- 2 eggs: Binds everything together and adds structure.
- 1 Tablespoon Pure Vanilla Extract: Enhances the cookie’s warm, inviting aroma.
- 2 teaspoons hot water: Helps activate the baking soda for perfect rise.
- 3 cups flour: The backbone that provides structure.
- 1 teaspoon baking soda: For that light, chewy texture.
- 1/2 teaspoon salt: Balances sweetness and elevates flavors.
- 1 1/2 Cups Ghirardelli Mini Chocolate Chips: Small chips melt evenly, delivering bursts of chocolate in every bite.
- 8 ounces cream cheese (softened): The star of the cheesecake filling, creating smooth creaminess.
- 1/2 cup Heavy Cream: Adds silkiness to the cheesecake blend.
- 1/2 cup sugar: Sweetens the filling perfectly.
- 1 teaspoon Pure Vanilla Extract: Brings a subtle fragrant lift to the filling.
- 2 drops Lemon Juice: Adds a hint of brightness that cuts through the richness.
- 1/2 cup Ghirardelli Mini Chocolate Chips (melted): For elegant chocolate swirls on top that dazzle the eyes and the palate.
How to Make Chocolate Chip Cookie Cups with Cheesecake Filling Recipe
Step 1: Prepare Your Cookie Dough
This step is where the magic starts. Preheat your oven to 350 degrees because soon, your kitchen will fill with the most comforting scent. In your stand mixer, cream together softened butter with sugar and brown sugar until you get a smooth, creamy mix with no lumps—a crucial step for that lush cookie texture. Beat in the eggs and vanilla to bring everything together. Dissolve the baking soda in hot water for better activation, then add it to your batter. Combine flour, salt, and chocolate chips separately, then slowly fold them into your wet mix on low speed until just combined. Resist the urge to overmix; you want that tender softness that makes cookie cups delightful.
Step 2: Shape and Bake Your Cookie Cups
Roll that luscious dough into large balls and place each one snugly into a muffin tin. Pop them in the oven and bake for about 15 minutes until they’re golden and have spread just enough to start forming cups. Once out of the oven, use a shot glass to gently press the center of each cookie ball down and up the sides of the muffin tin cavity—this creates the signature cup shape. A little tip: if the dough sticks to the glass, simply flick it off onto a wire rack to cool completely. This shaping step transforms familiar chocolate chip cookies into stunning desserts ready to hold the luscious cheesecake filling.
Step 3: Whip Up the Cheesecake Filling
While your cookie cups cool, it’s time for the velvety filling. In your mixer bowl, combine softened cream cheese, heavy cream, sugar, vanilla, and a couple of drops of lemon juice. Blend it all until you get a creamy mixture that’s perfectly smooth and light. This filling is the heart of the Chocolate Chip Cookie Cups with Cheesecake Filling Recipe, offering that classic rich cheesecake taste balanced beautifully with the cookie’s sweet chewiness.
Step 4: Fill Your Cookie Cups
Using a small spoon, delicately fill each cookie cup with the cheesecake mixture. Don’t be shy—it’s the creamy surprise that turns these cups into crowd-pleasers. Then, melt your mini chocolate chips carefully in the microwave and swirl a bit of melted chocolate on top of the cheesecake filling. These chocolate swirls add a touch of elegance and intensify the chocolate delight.
Step 5: Chill and Set
Place your filled cookie cups in a single layer into a container and refrigerate for about 4 hours, allowing them to set beautifully. This chilling period is essential to firm up the cheesecake filling and meld all the flavors together perfectly, making every bite sublime when you finally dig in.
How to Serve Chocolate Chip Cookie Cups with Cheesecake Filling Recipe

Garnishes
Add a little whimsy and extra flavor with a dusting of powdered sugar, a few fresh berries for contrast, or mint leaves for a pop of color. These simple touches can elevate your presentation and surprise your guests with bursts of freshness alongside the rich dessert.
Side Dishes
Pair your cookie cups with a scoop of vanilla bean ice cream or a drizzle of caramel sauce to amp up the indulgence. A cup of fresh coffee or a creamy latte also complements the dessert’s flavors perfectly, making your whole treat feel like a mini café experience at home.
Creative Ways to Present
For a party, serve these cookie cups on a pretty platter with decorative cupcake liners to keep them tidy and easy to grab. You can also layer them in a clear trifle dish alternating with fresh fruit or a berry compote for a stunning visual effect that tastes as good as it looks. The versatility in presentation makes this Chocolate Chip Cookie Cups with Cheesecake Filling Recipe ideal for any occasion.
Make Ahead and Storage
Storing Leftovers
After a party or an indulgent baking session, keep any leftover cookie cups in an airtight container in the fridge. They will stay fresh and delicious for up to 3 days. Just remember that the cookie cups might soften a bit as they sit, but the flavors intensify beautifully.
Freezing
If you want to enjoy these treats later, you can freeze them. Place the cookie cups in a single layer on a baking sheet to freeze solid, then transfer to a freezer-safe container or bag. They will keep well for up to one month. When you’re ready, thaw them overnight in the refrigerator before serving.
Reheating
For that freshly baked taste, warm your cookie cups in a low oven (about 300 degrees) for 5-7 minutes before filling them with cheesecake. Avoid reheating once filled, as the creamy filling is best enjoyed chilled. This reheating trick revives the cookie’s crispy edges while keeping the inside tender.
FAQs
Can I use regular chocolate chips instead of mini ones?
Absolutely! Regular chocolate chips work fine, though mini chips distribute more evenly and melt more smoothly inside the dough, delivering a consistent chocolate flavor in every bite.
Is it necessary to use cream cheese in the filling?
Cream cheese is essential for that authentic cheesecake flavor and creamy texture. Substituting it might change the taste and consistency, but mascarpone could be an alternative if you’re feeling adventurous.
Can I make these cookie cups gluten-free?
Yes, by using a gluten-free all-purpose flour blend, you can try adapting the recipe. Just make sure the blend you choose includes xanthan gum or another binder to keep the texture ideal.
How long do the cookie cups need to chill before serving?
The filling needs about 4 hours in the refrigerator to set properly. This chilling time helps the cheesecake filling firm up nicely for perfect slicing and serving without any mess.
Can I prepare the cookie dough ahead of time?
Definitely! You can prepare the dough a day in advance and keep it refrigerated. Chilling the dough can even enhance the flavor and texture of your cookie cups when baked.
Final Thoughts
I can’t recommend this Chocolate Chip Cookie Cups with Cheesecake Filling Recipe enough—it’s the kind of dessert that brings big smiles and satisfied sighs with every bite. Whether you’re surprising loved ones or treating yourself, this charming fusion of chocolate chip cookies and rich cheesecake filling is pure joy. Go ahead, roll up your sleeves, and make these delightful cups of happiness your next baking adventure!
Print
Chocolate Chip Cookie Cups with Cheesecake Filling Recipe
- Prep Time: 25 minutes
- Cook Time: 15 minutes
- Total Time: 4 hours 40 minutes
- Yield: 12 cookie cups
- Category: Dessert
- Method: Baking
- Cuisine: American
Description
These Chocolate Chip Cookie Cups with Cheesecake Filling are a delightful twist on classic cookies, combining a soft, chewy cookie shell with a creamy, luscious cheesecake center. Perfect for parties or an indulgent treat, these dessert cups are easy to make and sure to impress.
Ingredients
Cookie Dough
- 1 cup butter (softened)
- 1 cup sugar
- 1 cup brown sugar (packed)
- 2 eggs
- 1 tablespoon pure vanilla extract
- 2 teaspoons hot water
- 3 cups flour
- 1 teaspoon baking soda
- 1/2 teaspoon salt
- 1 1/2 cups Ghirardelli mini chocolate chips
Cheesecake Filling
- 8 ounces cream cheese (softened)
- 1/2 cup heavy cream
- 1/2 cup sugar
- 1 teaspoon pure vanilla extract
- 2 drops lemon juice
- 1/2 cup Ghirardelli mini chocolate chips (melted)
Instructions
- Prepare the Cookie Dough: Preheat the oven to 350°F (175°C). In the bowl of a stand mixer, combine softened butter, sugar, and brown sugar. Mix until smooth and creamy with no lumps. Add eggs and vanilla extract, then mix well. Dissolve baking soda in hot water and add to the mixture. In a separate bowl, whisk together flour, salt, and mini chocolate chips. Gradually add the dry ingredients to the wet ingredients and mix on low speed until fully combined.
- Form and Bake Cookie Cups: Roll the cookie dough into large balls and place each one into the compartments of a muffin tin. Bake in the preheated oven for approximately 15 minutes. Remove from oven, and while still warm, use a shot glass to gently press down the center of each cookie ball, pushing dough up the sides of the muffin cup to create a cookie cup shape. Carefully remove the cup from the glass and transfer it to a wire rack to cool. Repeat until all dough is used.
- Make the Cheesecake Filling: Once cookie cups have cooled, prepare the filling by mixing softened cream cheese, heavy cream, sugar, vanilla extract, and lemon juice in a stand mixer bowl. Mix until the filling is smooth, creamy, and well blended.
- Fill Cookie Cups: Use a small spoon to scoop the cheesecake filling into the center of each cooled cookie cup. Melt the chocolate chips in the microwave and drizzle a small amount over the filling in each cup for a beautiful swirl garnish.
- Chill and Serve: Arrange the filled cookie cups in a single layer in a container and refrigerate for about 4 hours until set. Serve chilled and enjoy this indulgent dessert treat!
Notes
- Make sure the butter and cream cheese are softened to room temperature to ensure smooth mixing.
- The shot glass method for shaping cookie cups works best when the cookies are warm but not hot.
- Use a wire rack to cool the cookie cups completely before filling to prevent the cheesecake from melting.
- For a stronger lemon flavor, you may add 1/4 teaspoon lemon zest to the cheesecake filling.
- Store leftover cookie cups refrigerated in an airtight container for up to 3 days.

